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Concepts#

Explanations of what presto does and why. Read these once and you'll understand every other page.

Start here if you're new to OpenFF or MLPs#

Bespoke SMIRNOFF in 5 minutes orients you to the moving parts: what a SMIRNOFF force field is, what "bespoke" means here, and where an MLP enters the picture.

Reference order#

  1. Bespoke SMIRNOFF in 5 minutes — vocabulary primer.
  2. Method overview — end-to-end pipeline with diagrams and equations.
  3. Sampling protocols — how training data is generated.
  4. Type generation and SMIRKS specificity — which parameters get their own SMIRKS, and why specificity matters.
  5. MLPs in presto — what each supported MLP gives you, and when to swap.
  6. Output directory layout — what presto writes to disk and where.